Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSAMARAIRSGDDAEVADGLTRREHDILAFERQWWKFAGVKEEAIKELFSMSATRYYQVLNALVDRPEALAADPMLVKRLRRLRASRQKARAARRLGFEVT
1SFX Chain:A ((13-62))
---------------LEKLSFKPSDVRIYSLLLE---RGGMRVSEIARELDLSARFVRDRLKVLLKRG----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SFX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17643 for 285 contacts (-61.9/contact) +
2D Compatibility (PS) -5593 + (NN) -2144 + (LL) 4820
1D Compatibility (HY) -2800 + (ID) 400
Total energy: -23760.0 ( -83.37 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_1SFX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SFX-query.scw
PDB file :
Tito_Scwrl_1SFX.pdb
: