Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLMRTWIPLVILVVVIVGGFTVHRIRGFFGSENRPS--YSDTNLENSKPFNPKHLTYEIFGPPGTVADISYFDVNSEPQRVDGAVLPWSLHITTNDAAVMGNIVAQGNSDSIGCRITVDGKVRAERVSNEVNAYTYCLVKSA
1A77 Chain:? ((209-316))
ISLDDLIDIAIFM----------------GTDYNPGGVKGIGFKRAYELVRSGVAKDVLKKEVEYYDEIKRIFKE--PKVTDNYSLSLK---LPDKEGIIKFLVDENDFN-------------YDRVKKHVDKLYNLIANKT
General information:
TITO was launched using:
RESULT:
Template:
1A77.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14246 for 603 contacts (-23.6/contact) +
2D Compatibility (PS) -11067 + (NN) -2039 + (LL) 2568
1D Compatibility (HY) -4400 + (ID) 600
Total energy: -29784.0 ( -49.39 by residue)
QMean score : 0.014
(partial model without unconserved sides chains):
PDB file :
Tito_1A77.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A77-query.scw
PDB file :
Tito_Scwrl_1A77.pdb
: