Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYESADGGELVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEASA
1Y0H Chain:B ((4-101))
--SPVAVIARFMPRPDARSALRALLDAMITPTRAEDGCRSYDLYESADGGELVLFERYRSRIALDEHRGSPHYLNYRAQVGELLTRPVAVTVLAPLDEAS-
General information:
TITO was launched using:
RESULT:
Template:
1Y0H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48192 for 655 contacts (-73.6/contact) +
2D Compatibility (PS) -10767 + (NN) -5701 + (LL) 404
1D Compatibility (HY) -12800 + (ID) 4900
Total energy: -81956.0 ( -125.12 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_1Y0H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y0H-query.scw
PDB file :
Tito_Scwrl_1Y0H.pdb
: