Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQLYTVDPD-TTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSGT-ADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG |
| 4BFA Chain:B ((26-254)) | -----------------------VLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAV--ELGSWGVDLNCG----------GGATLLKDPELIYQ-GAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQA-GATELVVHGRTKEQGYRAEHIDWQAIGDIRQRL-NIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIP-------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4BFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -126665 for 1896 contacts (-66.8/contact) +
2D Compatibility (PS) -23668 + (NN) -9945 + (LL) 8056
1D Compatibility (HY) -15200 + (ID) 3450
Total energy: -170872.0 ( -90.12 by residue)
QMean score : 0.394
|
|
|