Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIGNCSGFYGDRLSAMREMLTGGELDYLTGDYLAELTMLILGRDRMKNPDRGYAKTFLAQLEDCLGLAHDRG--VRIVT---NAGGLNPAGLANAVRALAARLGIP-AQVAHVEGDDLQPRAAELGL--GTPLTANAYLGAW--GIVDCFERGADVVVTGRVTDASVVVGAAAAHFGWGRTDYHRLAGAVVAGHVIECGVQATGGNYAFFTEIGDLTHAGFPLAEIAADGSSVITKHHGTGGLVSVDTITAQLLYEITGARYANPDVTARMDSVELSPDGPDRVRISGVIGEPPPPTYKVSLNSIGGFRNAMTFVLTGLDIDAKADLVRRQLEAALTVKPAELQWTLARTDHPDADTEETASALLTCVARDPDPANVGRQFSSAAVELALASYPGFTATAPPGDGQVYGVFTPGYVDAGKVAHIAVHADGTRTEIPCATETLELAPAHPPALPDPLPAGPTRRVPLGLIAGARSGDKGGSANVGVWVRTDEQWRWLAHTLTVELLKELLPETAGLVVTRHVLPNLRALNFVIEAILGQGVAYQARFDPQAKGLGEWLRSRHVEIPETLL |
| 4DBD Chain:A ((94-189)) | -------------------------------------------------------------LDELKRYLDANSKNLYLVAVMSHEGWS--TLFADYIKNVIREISPKGIVVGG----TKLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCAGADYEIIGRS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45245 for 535 contacts (-84.6/contact) +
2D Compatibility (PS) -9678 + (NN) -5900 + (LL) 27124
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -36299.0 ( -67.85 by residue)
QMean score : 0.333
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