Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVHLTRIYTRTGDDGTTGLSDMSRVAKTDARLVAYADCDEANAAIGAALALGHPDTQITDVLRQIQNDLFDAGADLSTPIVENPKHPPLRIAQSYIDRLEGWCDAYNAGLPALKSFVLPGGSPLSALLHVARTVVRRAERSAWAAVDAHPEGVSVLPAKYLNRLSDLLFILSRVAN---PDGDVLWRPGGDRTAS
2ZHZ Chain:C ((5-176))
----LSKIATRTGDDGTTGLGDGSRVRKDDARIAAIGDVDELNSQIGVLLAEPLPD-DVRAALSAIQHDLFDLGGELCI-----PGHAA--ITDAHLARLDGWLAHYNGQLPPLEEFILPGGARGAALAHVCRTVCRRAERSIVALGASEP--LNAAPRRYVNRLSDLLFVLARVLNRAAGGADVL----------
General information:
TITO was launched using:
RESULT:
Template:
2ZHZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74655 for 1266 contacts (-59.0/contact) +
2D Compatibility (PS) -18611 + (NN) -11947 + (LL) 1092
1D Compatibility (HY) -12800 + (ID) 4500
Total energy: -121421.0 ( -95.91 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_2ZHZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZHZ-query.scw
PDB file :
Tito_Scwrl_2ZHZ.pdb
: