Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMPTEYPATAEESVDVITDALLTASRLLVAISAHSIAQVDENITIPQFRTLVIL--SNHGPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVVRQVTEHRRTEIARIVEQMAPAERHGLVRALTAFTEAGGEPDARYEIE
4B8X Chain:B ((32-109))
-----------------------------------------GLTFARYEALVLLTFSKSGELPMSKIGERLMVHPTSVTNTVDRLVRSGLVAKRPNP-----TLATITDKGREVVEAAT-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4B8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63670 for 506 contacts (-125.8/contact) +
2D Compatibility (PS) -7337 + (NN) -1522 + (LL) 7908
1D Compatibility (HY) -6400 + (ID) 1250
Total energy: -72271.0 ( -142.83 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_4B8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B8X-query.scw
PDB file :
Tito_Scwrl_4B8X.pdb
: