Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVVAAHLGRPKDGPDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALAR-AEGLTGGDILLLENIRFDKRETSKNDDDRRALAKQLVELVGTGGVFVSDGFGVVHRKQASVYDIATLLPHYAGTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAAQGFSVGTSLLEDDMIEVCRGLL---ETYHDVLRLPVDLVVTEKFAADSPPQTVDVGAVPNGLMGLDIGPGSIKRFSTLLSNAGTIFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEVLSREQPTGGVL |
| 1V6S Chain:B ((1-389)) | -----MRTLLDLDPKGKRVLVRVDYNVPV-QDGKVQDETRILESLPTLRHLLAGGASLVLLSHLGRPK-GPDPKYSLAPVGEALRAHLP-EARFAPFPPGSEEARREAEALRPGEVLLLENVRFEPGE-EKNDPELSARYARL------GEAFVLDAFGSAHRAHASVVGVARLLPAYAGFLMEKEVRALSRLLKDPERPYAVVLGGAKVSDKIGVIESLLPRIDRLLIGGAMAFTFLKALGGEVGRSLVEEDRLDLAKDLLGRAEALGVRVYLPEDVVAAERIEAGVETRVFPARAIPVPYMGLDIGPKTREAFARALEGARTVFWNGPMGVFEVPPFDEGTLAVGQAIAAL--EGAFTVVGGGDSVAAVNRLGLKE-RFGHVSTGGGASLEFLEKGTLPGLEVLE--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V6S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -282289 for 3507 contacts (-80.5/contact) +
2D Compatibility (PS) -41828 + (NN) -18834 + (LL) 948
1D Compatibility (HY) -34800 + (ID) 9750
Total energy: -386553.0 ( -110.22 by residue)
QMean score : 0.626
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