Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
1UZL Chain:B ((9-247))
--------AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDT-------------ALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGMGMGH
General information:
TITO was launched using:
RESULT:
Template:
1UZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136988 for 1962 contacts (-69.8/contact) +
2D Compatibility (PS) -24941 + (NN) -11576 + (LL) 1588
1D Compatibility (HY) -28000 + (ID) 11250
Total energy: -211167.0 ( -107.63 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1UZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UZL-query.scw
PDB file :
Tito_Scwrl_1UZL.pdb
: