Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGATLIAGLDMDSDIEVVDLMALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYAGSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAGESLG----FTSGGVRLTRTKTRPYLGDLGAAVA-----PRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGAAVIEGVRRHCRDGSDPVVIAVSTRVAGARVGAGYGPGH-DLVEAGAVMVPRLPPSQARVLLMAALAANSPVADVIDRWG |
| 1HO3 Chain:B ((81-310)) | --------------------------------------------------------------------------------------DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARKHTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVFDTLATAAKTGT---AVVRSSRVP---TGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLAL-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150098 for 1784 contacts (-84.1/contact) +
2D Compatibility (PS) -24943 + (NN) -19971 + (LL) 5332
1D Compatibility (HY) -11200 + (ID) 4150
Total energy: -205030.0 ( -114.93 by residue)
QMean score : 0.439
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