Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSRPPT
3QB9 Chain:F ((3-161))
MQGDPDVLRLLNEQLTSELTAINQYFLHSKMQDNWGFTELAAHTRAESFDEMRHAEEITDRILLLDGLPNYQRIGSLRIGQTLREQFEADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLGEELYSAQCVSRPPT
General information:
TITO was launched using:
RESULT:
Template:
3QB9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21606 for 1189 contacts (-18.2/contact) +
2D Compatibility (PS) -17771 + (NN) -14205 + (LL) 0
1D Compatibility (HY) -22000 + (ID) 7950
Total energy: -83532.0 ( -70.25 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_3QB9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QB9-query.scw
PDB file :
Tito_Scwrl_3QB9.pdb
: