Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKLTT--MIKTAVAV--VAMAAIATFAAPVALAAYPITGKLGSELTMTDTVGQVVLGWKVSDLKSSTAVIPGYPVAGQVWEATATVNAIRGSVTPAVSQFNA---RTADGINYRVLWQAAGPDTISGATIPQGEQSTGKIYFDVTG-PSPTIVAMNNGMEDLLIWEP------------------------------------------------------ |
| 3SEO Chain:A ((2-240)) | HMRLLSEDLFKQSPKLSEQELDELANNLADYLFQAADID--WHQVISEKTTTEEMAKS-EHRYVQAFCREILKYP-DSVIDVALKRLQTGRERLFTTTDEKGNRELKKGDAILESAINAARMAISTEEKNTILSNNVKSATFEVFCELPCMDGFAEQNGKTAFYALRAGFYSAFKNTDTAKQDITKFMKDNLQAGFSGYSYQGLTNRVAQLEAQLAALSAKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24424 for 970 contacts (-25.2/contact) +
2D Compatibility (PS) -15878 + (NN) 3382 + (LL) 240
1D Compatibility (HY) -800 + (ID) 1000
Total energy: -38480.0 ( -39.67 by residue)
QMean score : 0.025
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