Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYSGVVSRTNIEIDDELVAAAQRMY---RLDSKRSAVDLALRRLVGEPLGRDEALALQGSGFDFSNDEIESFSDTDRKLADES
2WVF Chain:A ((9-56))
----SIIRFSVSLQQNLLDELDNRIIKNGYSSRSELVRDMIREKLVEDNWAE-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WVF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9777 for 185 contacts (-52.8/contact) +
2D Compatibility (PS) -5304 + (NN) -6352 + (LL) 1468
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -22265.0 ( -120.35 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_2WVF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WVF-query.scw
PDB file :
Tito_Scwrl_2WVF.pdb
: