Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGDQELELRFDVPLYTLAEASRYLVVPRATLATWADGYERRPANAPAVQGQPIITALPHPTGSHARLPFVGIAEAYVLNAFRRAGVPMQRIRPSLDWLIKNVGPHALASQDLCTDGAEVLWRFAERSGEGSPDDLVVRGLIVPRSGQYVFKEIVEHYLQQISFADDNLASMIRLPQYGDANVVLDPRRGYGQPVFDGSGVRVADVLGPLRAGATFQAVADDYGVTPDQLRDALDAIAA |
| 4R4E Chain:B ((6-82)) | ---------RRSMPLFPIGIVMQLTELSARQIRYYEENG----------LIFPART-----EGNRRLFSFHDVDKLLEIKHLIEQGVNMAGIKQILAKAEA------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30514 for 494 contacts (-61.8/contact) +
2D Compatibility (PS) -8333 + (NN) -1023 + (LL) 9152
1D Compatibility (HY) -2800 + (ID) 600
Total energy: -34118.0 ( -69.06 by residue)
QMean score : 0.443
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