Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTLPVQRHPRSLFPEFSELFAAFPSFAGLRPTFDTRLMRLEDEMKEGRYEVRAELPGVDPDKDVDIMVRDGQLTIKAER-----TEQKDFDGRSEFAYGSFVRTVSLPVGADEDDIKATYDKGILTVSVAVSEGKPTEKHIQIRSTN
3GLA Chain:B ((20-94))
------------------------------------------------------ADLPGIDPSQ-IEVQMDKGILSIRGERKSESSTETERFS-RIERRYGSFHRRFALPDSADADGITAAGRNGVLEIRI------------------
General information:
TITO was launched using:
RESULT:
Template:
3GLA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37357 for 380 contacts (-98.3/contact) +
2D Compatibility (PS) -7976 + (NN) -6134 + (LL) 4756
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -53011.0 ( -139.50 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_3GLA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GLA-query.scw
PDB file :
Tito_Scwrl_3GLA.pdb
: