Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLSGFWHWAVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTYEQR
4BEG Chain:B ((4-178))
-TTSPDPYAALPKLPSFSLTSTSITDGQPLATPQVSGIMGAGGADASPQLRWSGFPSETRSFAVTVYDPDAPTLSGFWHWAVANLPANVTELPEGVGDGRELPGGALTLVNDAGMRRYVGAAPPPGHGVHRYYVAVHAVKVEKLDLPEDASPAYLGFNLFQHAIARAVIFGTYEQR
General information:
TITO was launched using:
RESULT:
Template:
4BEG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80629 for 1453 contacts (-55.5/contact) +
2D Compatibility (PS) -19032 + (NN) -16643 + (LL) 208
1D Compatibility (HY) -20800 + (ID) 8750
Total energy: -145646.0 ( -100.24 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_4BEG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BEG-query.scw
PDB file :
Tito_Scwrl_4BEG.pdb
: