Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPGRFRNFGSQNLGSGNIGSTNVGSGNIGSTNVGSGNIGDTNFGNGNNGNFNFGSGNTGSNNIGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGSGNIGFGNSGTGNVGLFNSGTGNVGFGNSGTANTGFGNAGNVNTGFWNGGSTNTGLANAGAGN--TGFFDAGNYNFGSLNAGNINSSFGNSGDGNSGFLNAGDVNSG----VGNAGDVNTGLGNSGNINTGGFNPGTLNTGFFSAMTQAGPNSGFFNAGTGNSGFGHNDPAGSGNSGIQNSGFGNSGYVNTSTTSMFGGNSGVLNTGYGNSGFYNAAVNNTGIF---VTGVMSSGFFNFGTGNSGLLVSGNGLSGFFKNLFG |
| 4AUI Chain:A ((20-327)) | ---DVTLYGTIKAGVETSRSVAHHGAQADRVKTATEIADL-------------------GSKIGFK------------GQEDLGNGLKAIWQLEQKAYVSGT------DTGWGNRQSFIGLKGGFGKVRVGRLNNILKDTGNFNP--WEGKSYYSGLSNIAQPEERHVSVRYDSPEFAGFSGSVQYVPNDNSGKNRSESYHAGFNYKNDGFFVQYAGSYKRHNYTTEKHQVHRLVGGYDHDALYASVAVQQQDAKLTWRDD-NSHNSQTEVATTVAYR-----FGNV----TPRVSYAHGFKGSVYDADHDNTYDQVVVGAEYDFSKRTSALVSAGWLQKGKGAEKFVATVGGVGLRHKF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 85925 for 2284 contacts (37.6/contact) +
2D Compatibility (PS) -31626 + (NN) -22945 + (LL) -2072
1D Compatibility (HY) -2400 + (ID) 2950
Total energy: 23932.0 ( 10.48 by residue)
QMean score : 0.096
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