Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAAGVRSTRQRAAISTLLETLDDFRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDTLHTDTGESVYRRCSE-HHHHHLVCRSCGSTIEVGDHEVEAWAAEVATKHGFSDVSHTIEIFGTCSDCRS
3MWM Chain:B ((11-133))
------RATRQRAAVSAALQEVEEFRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVDVLRTAEGESVYRRCSTGDHHHHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGTCADC--
General information:
TITO was launched using:
RESULT:
Template:
3MWM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43160 for 791 contacts (-54.6/contact) +
2D Compatibility (PS) -13969 + (NN) -10440 + (LL) 560
1D Compatibility (HY) -12400 + (ID) 3800
Total energy: -83209.0 ( -105.19 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_3MWM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MWM-query.scw
PDB file :
Tito_Scwrl_3MWM.pdb
: