Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHWAPGSDFESIRWRLDVWNASAQVSSDVL
4QIH Chain:B ((3-215))
--ARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEW----EPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGH--------SIRWRLDVWNAS--------
General information:
TITO was launched using:
RESULT:
Template:
4QIH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66578 for 1714 contacts (-38.8/contact) +
2D Compatibility (PS) -22313 + (NN) -13897 + (LL) 844
1D Compatibility (HY) -24400 + (ID) 10050
Total energy: -136394.0 ( -79.58 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_4QIH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QIH-query.scw
PDB file :
Tito_Scwrl_4QIH.pdb
: