Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQKGRQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEHITSLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKCRLYCGACDAGARSTTSLAAGNGL
4X0E Chain:B ((9-199))
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQKGRQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPG------------------ALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKCRLY--------------------
General information:
TITO was launched using:
RESULT:
Template:
4X0E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118723 for 1383 contacts (-85.8/contact) +
2D Compatibility (PS) -19231 + (NN) -12062 + (LL) 1864
1D Compatibility (HY) -24800 + (ID) 8650
Total energy: -181602.0 ( -131.31 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_4X0E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X0E-query.scw
PDB file :
Tito_Scwrl_4X0E.pdb
: