Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIAHSTVLVAPVSPSTASSRTDT
2G38 Chain:D ((2-174))
-AFEAYPPEVNSANIYAGPGPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYEWAHHDMVPLAQIYNNRAERQILIDNNALGQFTAQIADLDQEYDDFWDEDGEVMRDYRLRVSDALSKLTPWKAPPPIA--------------------
General information:
TITO was launched using:
RESULT:
Template:
2G38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36913 for 1079 contacts (-34.2/contact) +
2D Compatibility (PS) -18744 + (NN) -6421 + (LL) 1104
1D Compatibility (HY) -24400 + (ID) 8600
Total energy: -93974.0 ( -87.09 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_2G38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G38-query.scw
PDB file :
Tito_Scwrl_2G38.pdb
: