Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEHEGKPFFGSLLEFITSGPVVAAIVEGTRAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA
4ANE Chain:F ((2-136))
-TERTLVLIKPDGIERQLIGEIISRIERKGLTIAALQLRTVSAELASQHYAEH--------LLEFITSGPVVAAIVEGTNAIAAVRQLAGGTDPVQAAAPGTIRGDFALETQFNLVHGSDSAESAQREIALWFPGA
General information:
TITO was launched using:
RESULT:
Template:
4ANE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78404 for 988 contacts (-79.4/contact) +
2D Compatibility (PS) -13585 + (NN) -3348 + (LL) 128
1D Compatibility (HY) -15600 + (ID) 6300
Total energy: -117109.0 ( -118.53 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_4ANE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ANE-query.scw
PDB file :
Tito_Scwrl_4ANE.pdb
: