Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEKAPQKSVADFWFDPLCPWCWITSRWILEVAKV--RDIEVNFHVMSLAILNENRDDLPEQYREGMARAWGPVRVAIAAEQAHGAKVLDPLYTAMGNRIHNQGN----HELDEVITQSLADAGLPAELAKAATSD-AYDNALRKSHHAGMDAVGEDVGTPTIHVNGVAFFGPVLSKIPRGEEAGKLWDASVTFASYPHFFELKRTRTEPPQFD
2REM Chain:A ((20-186))
-FAPLAGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAVFGG-----------------VWDPFARAYLAADVL-G--VAKRSHTAMFEAIHEKGSVPIQNVGPDELAVFYAGYGVQPDRFVATFNGPEVEKRFQAARAYA-LKVR-PVGTPTIVVNGRY-----MVTGHDFEDTLRITDYLVSRE-------------------
General information:
TITO was launched using:
RESULT:
Template:
2REM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78806 for 1267 contacts (-62.2/contact) +
2D Compatibility (PS) -17371 + (NN) -6682 + (LL) 2600
1D Compatibility (HY) -800 + (ID) 1650
Total energy: -102709.0 ( -81.06 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_2REM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2REM-query.scw
PDB file :
Tito_Scwrl_2REM.pdb
: