Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPIPAPSPDARAVVTGASQNIGAALATELAARGHHLIVTARREDVLTELAARLADK-YRVTVDVRPADLADPQERSKLADELAARP-----ISILCANAGTAT-FGPIASLDLAGEKTQVQLNAVAVHDLTLAVLPGMIERKAGGILISGSAAGNSPIPYNATYAATKAFVNTFSESLRGELRGSGVHVTVLAPGPV---------------RTELPDASEASLVEKLVPDFLWISTEHTARVSLNALERNKMRVVPGLTSKAMSVASQYAPRAIVAPIVGAFYKRLGGS |
| 3ASV Chain:F ((4-232)) | ------------LVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVR--------NRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLE----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ASV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111242 for 1626 contacts (-68.4/contact) +
2D Compatibility (PS) -22051 + (NN) -6610 + (LL) 3212
1D Compatibility (HY) -13600 + (ID) 3900
Total energy: -154191.0 ( -94.83 by residue)
QMean score : 0.457
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