Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIVGVGIDLVSIPDFAEQVDQPGTVFAETFTPGERRDASDKSSSAARHLAARWAAKEAVIKAWSGSRFAQRPVLPEDIHRDIEVVTDMWGRPRVRLTGAIAEYLADVTIHVSLTHEGDTAAAVAILEAP
3NE1 Chain:C ((2-130))
-GIVGVGIDLVSIPDFAEQVDQPGTVFAETFTPGERRDASDKSSSAARHLAARWAAKEAVIKAWSGSRFAQRPVLPEDIHRDIEVVTDMWGRPRVRLTGAIAEYLADVTIHVSLTHEGDTAAAVAILEAP
General information:
TITO was launched using:
RESULT:
Template:
3NE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69821 for 976 contacts (-71.5/contact) +
2D Compatibility (PS) -13936 + (NN) -5056 + (LL) 208
1D Compatibility (HY) -15200 + (ID) 6450
Total energy: -110255.0 ( -112.97 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3NE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NE1-query.scw
PDB file :
Tito_Scwrl_3NE1.pdb
: