Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTRSREEYFNLPLKVDESSGTIGKMFVLVIYDISDNRRRASLAKILAGFGY-RVQESAFEAMLTKGQLAKLVARIDRFAID-CDNIRIYKIRGVA--AVTFYGRGRLVSAEEFVFF
3EXC Chain:X ((4-83))
-------------------------MKLLVVYDVSDDSKRNKLANNLKKLGLERIQRSAFEGDMD--RMKDLVRVVKLIVDTNTDIVHIIPLGIRDWERRIVIGR------------
General information:
TITO was launched using:
RESULT:
Template:
3EXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56867 for 445 contacts (-127.8/contact) +
2D Compatibility (PS) -8230 + (NN) -3226 + (LL) 2160
1D Compatibility (HY) -7200 + (ID) 1200
Total energy: -74563.0 ( -167.56 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3EXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EXC-query.scw
PDB file :
Tito_Scwrl_3EXC.pdb
: