Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIDMAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIARETDEAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQV------PGESYEHGNRLRCYVVGVTRGAREPLITLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAVRSNVAGLNAKGACIGPMGQRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPPPPPGQPEPGVSRGMAHDR |
2K4K Chain:A ((6-80)) | -------------------------------------------------------------------------------------------------------------EVGSVYTGKVTGLQA----YGAFVALDE---ETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVLAVDEE--KGKISLSIRATQ---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K4K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29723 for 481 contacts (-61.8/contact) +
2D Compatibility (PS) -7825 + (NN) -5979 + (LL) 18936
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -29191.0 ( -60.69 by residue)
QMean score : 0.565
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