Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
3LF0 Chain:C ((3-114))
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGR------------YSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
General information:
TITO was launched using:
RESULT:
Template:
3LF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74592 for 674 contacts (-110.7/contact) +
2D Compatibility (PS) -10954 + (NN) -2075 + (LL) 672
1D Compatibility (HY) -15600 + (ID) 5000
Total energy: -107549.0 ( -159.57 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_3LF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LF0-query.scw
PDB file :
Tito_Scwrl_3LF0.pdb
: