Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELPEVEVVRRGLQAHVTGRTITEVRVHHPRAVRRHDAGPADLTARLRGARINGTDRRGKYLWLTLNTAGVHRPTDTALVVHLGMSGQMLLGAV--PCAAHVRISALLDDGTVLSFADQRTFGGWLLADLVTVDGSVVPVPVAHLARDPLDPRFDCDAVVKVLRRKHSELKRQLLDQRVVSGIGNIYADEALWRAKVNGAHVAATLRCRRLGAVLHAAADVMREALAKGGTSFDSLYVNVNGESGYFERSLDAYGREGENCRRCGAVIRRERFMNRSSFYCPRCQPRPRK |
3GQ4 Chain:A ((1-272)) | -PQLPEVETIRRTLLPLIVGKTIEDVRIFWPNIIR-HPRDSEAFAARMIGQTVRGLERRGKFLKFLLD--------RDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRP---PLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGSTVRT-YVNTQGEAGTFQHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQ----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -142429 for 2267 contacts (-62.8/contact) +
2D Compatibility (PS) -28934 + (NN) -11733 + (LL) 984
1D Compatibility (HY) -16000 + (ID) 4900
Total energy: -203012.0 ( -89.55 by residue)
QMean score : 0.523
|
|
|