Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLLDAHIPQLIASHTAFAAKAGLMRHTIGQAEQQAMSAQAFHQGESAAAFQGAHARFVAAAAKVNTLLDIAQANLGEAAGTYVAADAAAASSYTGF
2G38 Chain:B ((20-97))
------GPDSMLAAARAWRSLDVEMTAVQRSFNRTLLSLMDAWAGPVVMQLMEAAKPFVRWLTDLCVQLSEVERQIHEIVRAYE-------------
General information:
TITO was launched using:
RESULT:
Template:
2G38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9889 for 423 contacts (-23.4/contact) +
2D Compatibility (PS) -8668 + (NN) -4918 + (LL) 1436
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -24589.0 ( -58.13 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_2G38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G38-query.scw
PDB file :
Tito_Scwrl_2G38.pdb
: