Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPGGAAPEVTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDF--QPVAVLDWEMVALGPRELDVAWMIFAHRVFQEL-AGLA----TLPGLPEVMREDDVRATYQALTGVEL-GDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
| 3DXP Chain:A ((20-328)) | --------------------RFDTEALEAWMRQHVEGF-AGPLSVE--QFKG-QSNPTFKLVTP--------GQTYVMRAKPG----------AIEREYRVMDALAG-TDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS-------L-PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYG---KPGNYFQRQIERWTKQYKLSE--TESIPAMDSLMDWLPQHIPQE-DADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMGDFGYHCMSWHIAPGQFRGIAGLDHAALGIPDE---ASYRKLYEQRTGRPITGDWNFYLAFSMFRIAGILQGIMKRVVD---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DXP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193995 for 2155 contacts (-90.0/contact) +
2D Compatibility (PS) -30723 + (NN) -11835 + (LL) 4492
1D Compatibility (HY) -16800 + (ID) 3200
Total energy: -252061.0 ( -116.97 by residue)
QMean score : 0.494
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