Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSLAERTVLVTGANRGMGREYVAQLLGRKVAKVYA-ATRNPLAIDVSD---PRVIPLQLDVTDAVSVAEAADLATD----VGILINNAGISRASSVLDKDTSALRGELETNLFGPLALASA-FADRIAERSGAIVNVSSVLAWLPLG-MSYGVSKAAMWSATESMRIELAPRGVQVVGVYVGLVDTDMGRFADAPKSDPADVVRQVLDGIEAGKEDVLADEMSRQVRASLNVPARERIARLMGN
4WK6 Chain:D ((9-197))
--NLEGKVALVTGASRGIGKA-IAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT---LLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVAS--------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4WK6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71540 for 1253 contacts (-57.1/contact) +
2D Compatibility (PS) -18457 + (NN) -7443 + (LL) 4988
1D Compatibility (HY) -10800 + (ID) 3150
Total energy: -106402.0 ( -84.92 by residue)
QMean score : 0.429
(partial model without unconserved sides chains):
PDB file :
Tito_4WK6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WK6-query.scw
PDB file :
Tito_Scwrl_4WK6.pdb
: