Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRGRAQRDPGRARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAPPDVPS
1W2H Chain:B ((1-209))
MLIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAFPRYGQSVAADIAAEALHGEHGDLASSVYAMATLFALDRAGAVHTIQGLCRGYDVVILDRYVASNAAYSAARLHENAAGKAAAWVQRIEFARLGLPKPDWQVLLAVSAELAGERSRG--------ARDNYERDAELQQRTGAVYAELAAQGWGGRWLVVGADVDPGRLAATLAP-----
General information:
TITO was launched using:
RESULT:
Template:
1W2H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121035 for 1894 contacts (-63.9/contact) +
2D Compatibility (PS) -22833 + (NN) -17564 + (LL) -16
1D Compatibility (HY) -24400 + (ID) 10000
Total energy: -195848.0 ( -103.40 by residue)
QMean score : 0.897
(partial model without unconserved sides chains):
PDB file :
Tito_1W2H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2H-query.scw
PDB file :
Tito_Scwrl_1W2H.pdb
: