Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRSERLVITGAGGQLGSHLTAQAAREGRDMLALTSSQWDITDPAAAERIIRH--GDVVINCAAYTDVDGAESNEAVAYAVNATGPQHLARACARVGARLIHVSTDYVFDGDFGGAEPRPYEPTDETAPQGVYARSKLAGEQAVLAAFPEAAVVRTAWVYTGGTGKDFVAVMRRLAAGHGRVDVVDDQTGSPTYVADLAEALLALADAGVRGRVLHAANEGVVSRFGQARAVFEECGADPQRVRPVSSAQFPRPAPRSSYSALSSRQWALAGLTPLRHWRSALATALAAPANSTSIDRRLPSTRD |
| 3SC6 Chain:F ((5-277)) | ----KERVIITGANGQLGKQLQEELNPEEYDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYVFQGD----RPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYFIVRTSWLY-GKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSLYG-TYHVSNTGSCSWFEFAKKIFSYANMKV-NVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130288 for 2368 contacts (-55.0/contact) +
2D Compatibility (PS) -30029 + (NN) -19243 + (LL) 1620
1D Compatibility (HY) -24000 + (ID) 5200
Total energy: -207140.0 ( -87.47 by residue)
QMean score : 0.506
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