Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNPIQAPDGGQGWPAAALGPAQRAVAWKRLGTEQFDVVVIGGGVVGSGCALDAATRGLKVALVEARDLASGTSSRSSKMFHGGLRYLEQLEFGLVREALYERELSLTTLAPHLVKPLPFLFPLTKRWWERPY------IAAGIFLYDRLGGAKSVPAQRHFTRAGALRLSPGLKRSSLIGGIRYYDTVVDDARHTMTVARTAAHYGAVVRCSTQVVALLREGDRVIGVGVRDSENGAVAEVRGHVVVNATGVWT----DEIQALSKQRGRFQVRASKGVHVVVPRDRIVSDVAMILRTEKSVMFVIPWGSHW-IIGTTDTDWNLDLAHPAATKADIDYILGTVNAVLATPLTHADIDGVYAGLRPLLAGESDDTSKLSREHAVAVP----AAGLVAIAGGKYTTYRVMAADAIDAAVQFIPARVAPSITEKVSLLGA--DGYFALVNQAEHVGALQGLHPYRV----RHLLDRYGSLISDVLAMAASDPSLLSPITEAPG--YLKVEAAYAAAAEGALHLEDILARRMRISIEYPHRGVDCAREVAEVVAPVLGWTAADIDREVANYMARVEAEVLSQAQPDDVSADMLRASAPEARAEILEPVPLD |
2R4E Chain:B ((27-472)) | ----------------------------------------------------------LSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREV-LLKMAPHIAFPMRFRLP------HRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKR-----GFEYSDCWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWI-VEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPYG---IRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEESEINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQG-IGPAWTKESVLPGGAIEG-----DRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGT----VSDLGEDFGHEFYEAELKYLVDHEWVRRADDALWRRTK------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R4E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197358 for 3364 contacts (-58.7/contact) +
2D Compatibility (PS) -45262 + (NN) -10334 + (LL) 10656
1D Compatibility (HY) -22800 + (ID) 7600
Total energy: -272698.0 ( -81.06 by residue)
QMean score : 0.318
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