Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAAPTLQTIRLAPKALLHDHLDGGLRPATVLDIAGQVGYDDLPATDVDALASWFRTQSHSGSLERYLEPFSHTVA-VMQTPEALYRVAFECAQDLAADSVVYAEVRFAPELHI------------SCGLSFDDVVDTVLTGFAAGEKACAADGQPITVRCLVTAMRHAAM-SREIAELAIRFRDKGVVGFDIAGAEAGHP---PTRHLDAFEYMRDHNARFTIHAGEAFGLPSIHEAIAFCGADRLGHGVRIVDDIDVDADGGFQLGRLAAILRDKRIPLELCPSSNVQTGAVASIAEHPFDLLARARFRVTVNTDNRLMSDTSMSLEMHRLVEAFGYGWSDLARFTVNAMKSAFIPFDQRLAIIDEVIKPRFAALMGHSE |
| 3IAR Chain:A ((3-354)) | ---------AFDKPKVELHVHLDGSIKPETILYYGRRRGIA-LPANTAEGLLNVIG-MDKPLTLPDFLAKFDYYMPAIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQGLQEGER-----DFGVKARSILCCMRHQPNWSPKVVELCKKYQQQTVVAIDLAGDETIPGSSLLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKTERLGHGYHTLEDQA-----------LYNRLRQENMHFEICPWSSYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIFKSTLDTDYQMTKRDMGFTEEEFKRLNINAAKSSFLPEDEKRELLDL-LYKAYGMPPSA-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IAR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -212383 for 2994 contacts (-70.9/contact) +
2D Compatibility (PS) -35742 + (NN) -7053 + (LL) 1660
1D Compatibility (HY) -17600 + (ID) 4800
Total energy: -275918.0 ( -92.16 by residue)
QMean score : 0.441
|
|
|