Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSISASEARQRLFPLIEQVNTDHQPVRITSRAG-DAVLMSADDYDAWQETVYLLRSPENARRLMEAVARDKAGHS-AFTKSVDELREMAGGEE
3G5O Chain:A ((9-97))
RILPISTIKGKLNEFVDAVSSTQDQITITKNGAPAAVLVGADEWESLQETLYWLAQPGIRESIAEADADIASGRTYGEDEIRAEFGVPR----
General information:
TITO was launched using:
RESULT:
Template:
3G5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15400 for 420 contacts (-36.7/contact) +
2D Compatibility (PS) -9198 + (NN) -2920 + (LL) -136
1D Compatibility (HY) -4400 + (ID) 1050
Total energy: -33104.0 ( -78.82 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_3G5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G5O-query.scw
PDB file :
Tito_Scwrl_3G5O.pdb
: