Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAPVSVSATTTDGLGLTGRGEGLAAIATALVVSLR
2UZH Chain:C ((5-148))
---LPRVGLGTDVHPIEAGRPCRLLCLEFDDADGCAGHSDGDVAAHALCDALLSAAGLGDLGTIFGTDRPQWRGASGADMIRHVRGLVENAGFVIGNATVQVIGNRPKVGPRREEAQQVLSELVGAPVSVSATTTDGLGLTGRGEGL------------
General information:
TITO was launched using:
RESULT:
Template:
2UZH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109288 for 1119 contacts (-97.7/contact) +
2D Compatibility (PS) -16017 + (NN) -15175 + (LL) 1888
1D Compatibility (HY) -12400 + (ID) 5450
Total energy: -156442.0 ( -139.81 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_2UZH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UZH-query.scw
PDB file :
Tito_Scwrl_2UZH.pdb
: