Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRVGGRRRGRSGSGRGRGAIDREQSAAIREWARRNGHNVSTRGRIPADVIDAYHAAT
4E1P Chain:A ((4-58))
---KVTVTLVDDFDGSGAADETVEFGLDGVTYEIDLSTKNATKLRGDLKQWVAAGRRV------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4E1P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -938 for 285 contacts (-3.3/contact) +
2D Compatibility (PS) -5987 + (NN) -1607 + (LL) 2548
1D Compatibility (HY) -6800 + (ID) 2750
Total energy: -15534.0 ( -54.51 by residue)
QMean score : 0.307
(partial model without unconserved sides chains):
PDB file :
Tito_4E1P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E1P-query.scw
PDB file :
Tito_Scwrl_4E1P.pdb
: