Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVYTGSDAGDHASAPQPSGSGSVPASVNVPGLVVAAVWAVGLVAGLVALTIGHLAVAAAALVVAVMAPWCRVAYIAHGQHRVCGETLRGTPAGETASFPTGWRGLRFSTR
1Q90 Chain:G ((1-30))
---------------------------------MVEPLLCGIVLGLVPVTIAGLFVTAYLQYL-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Q90.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7048 for 114 contacts (-61.8/contact) +
2D Compatibility (PS) -3199 + (NN) -1555 + (LL) 3160
1D Compatibility (HY) -4400 + (ID) 500
Total energy: -13542.0 ( -118.79 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_1Q90.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q90-query.scw
PDB file :
Tito_Scwrl_1Q90.pdb
: