Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLFGKRKSRATRRAEARAIKARAKLEAKLSAKNEARRIKAAQRAESKALKAQLKARRDSDRAALKVAEAELKVAREGKLLSPTRIRRLLTVSRLLAPILTPVIYRAAMAARGLIDQRRADQLGVPLAQIGRFSGHGARLSARVGGAERSLRMVQEKKPKDVETKQFVSAVTNRLTDLSAAVAAAEHMPAKRRRTAHSAISSQLDGIEADLMARLGLT |
2K6I Chain:A ((1-47)) | ------MGVSVMEAIKEVKLAEEQAVKEIEEAKNRAEQIKAEAIEEAKKLIAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10630 for 180 contacts (59.1/contact) +
2D Compatibility (PS) -5046 + (NN) -3010 + (LL) 13868
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 14692.0 ( 81.62 by residue)
QMean score : 0.739
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