Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKFKGALVVGALRLFALLPWRAVQGVGAGIGWLMWKLPNRSREVVRINLSKCFPELSETELEKLVGQSLMDIGRTLTESACAWIWPPEKSLRYIREVEGMEVLEE---ALASGDGLVGITSHLGNWEVLNHFYCSY-------AKPIIFYRPPK--LKAVDELLKKQRVQLGNRVAPS-----------------TPEGILSVIKEV-KKGGCVGIPADPEPARTAGLFVPYLGT--TALISKF----VPQLLSRGKAR--GVFFHAVRLP--------DGSGYKVILEAAPADMYDKDLEVSVAAMSRELAKYVRAYPSQYMWSMKRFKNRPDGEKKWY |
1IUQ Chain:A ((111-312)) | -----------------------------------------------------------------------------------------------SFVGNLSLFKDIEEKLQQGHNVVLISNHQTEADPAIISLLLEKTNPYIAENTIFVAGDRVLADPLCKPFSIG----RNLICVYSKKHMFDIPELTETKRKANTRSLKEMALLLRGGSQLIWIAPSGGRDR-PDP---STGEWYPAPFDASSVDNMRRLIQHSDVPGHLFPLALLCHDIMPPPRVIAFNGAGLSVAPEISFEEIAATHKNPEEVREAYSKALFDSVAMQYNVLKTAISGKQGLGAST |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IUQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53460 for 966 contacts (-55.3/contact) +
2D Compatibility (PS) -15305 + (NN) -7467 + (LL) 8440
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -72492.0 ( -75.04 by residue)
QMean score : 0.408
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