Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNQRQYPRTPLKC--RIRISHPLFGELM-----AQTRD---LSDTGVYVKHPD------------LTQLPTGSVVTGQVQDLPIDAPILQME-------------------VVRVDAEGVGLRFLSEA
3BT3 Chain:A ((134-264))
ERGYVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHPFRGFHLFKGEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI
General information:
TITO was launched using:
RESULT:
Template:
3BT3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11306 for 480 contacts (-23.6/contact) +
2D Compatibility (PS) -9402 + (NN) -1440 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -27448.0 ( -57.18 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_3BT3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BT3-query.scw
PDB file :
Tito_Scwrl_3BT3.pdb
: