Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVYRLLALKARPVEKGLIVVAANIHQLDFLLEDLPDVWLDRLAGTWPGPNTWLVPHQERLPEWVTGVHDSVAVRVTDHPLVQELCHLTG-PLISTSANPAGRPAARTRLRVEQYFHDELDAILGGALGGRRNPSLIRDLVTG-QVIRPA
2EQA Chain:A ((14-197))
---IDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKDIPDKVLEIAQIVWPGPLTFVLKKTERVPKEVTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRPSPTKAEDVIVDLNGRVDVIIDGGHTFFGVESTIINVTVEPVLLRPG
General information:
TITO was launched using:
RESULT:
Template:
2EQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126026 for 1550 contacts (-81.3/contact) +
2D Compatibility (PS) -20236 + (NN) -16760 + (LL) 384
1D Compatibility (HY) -10400 + (ID) 3150
Total energy: -176188.0 ( -113.67 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_2EQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQA-query.scw
PDB file :
Tito_Scwrl_2EQA.pdb
: