Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHRLLSDRARGWRRALCGIVLGLLAWSAHGVPAKAPQDLRIDGEVLPGRSIDLLEQALSRVKFNTDPQQLRRGLVENRLLARAVEDQLTAQSRADLDASVEIEAGNLLEQVYGRRYREDLGPYLRQPRALSAERLREVLAPRSRGLVENSLLLDETQRREAAGVELIGWQFPGQPAQVLDLLSLYEGDNVQGQVELQQGNLAYLARQVQTRIRRDYLWYRLARDGFG-PAERQGVRTLVRDKLVRHRYLHQIGLYSDFHHESDALRELAGKVSDKDAEAYYRRNLERYRNVAQVQAAHIRLADQASADKVYAELRG------GLAFDEAVRRYSLADDRDRDPPGDLGLIRPQDGRLDLLRKTALIQKADTVS-QPMRIDGAFEIVRVRSREDRQLPLDDRSVRFEVNQAVAREQLAAQFETRLRNLLAGARVEGL |
| 3RFW Chain:A ((22-273)) | ----------------------------------------------------------------------------------------------------------------------------------------------ATVATVNGKSISDTEVSEFFAPMLRGQDF-----KT--------------------LPDNQKKALIQQYIMQDLILQDAKKQNLEKDPLYTKELDRAKDAILVNVYQEK-------------ILN-TIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDP-GSKNQGGELGWFDQSTMVKPF-TDAAFALKNGTITTTPVKTNFGYHVILKENSQAKGQ-IKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19127 for 1491 contacts (-12.8/contact) +
2D Compatibility (PS) -27315 + (NN) -17274 + (LL) 12604
1D Compatibility (HY) -5600 + (ID) 2200
Total energy: -58912.0 ( -39.51 by residue)
QMean score : 0.371
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