Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSPNILFIMADQMAAPLLPLHDPRSVLRMPHLSRLAERAVVFDSAYCNSPLCAPSRFTLVSGRLPTRIGAWDNAAD-----FAADTPTYAHYLRNLGYRTALSGKMHFCGPDQ--------LHGYEERLTSDIYPADYGWAVNWD-EPE----VRPSWYHNMSSVLQAGPCVRTNQLDFDEEVVFKARQYLYDHVRQHAGQPFCLTVSMTHPHDPYSIPASYWNLYRDEDIPLPRQRFAQEEQDPHSQRLLKVIDLWDKPLPEERIRAARRAYFGACSYVDAQIGALLATLEKCGLADDTIVVFSGDHGDML------------GER-GLWY-KMHWFEMAARVPLLVHAPAR-FAPRRIGASVSTVDLLPTLVELAGGQVDPRLPLEGRSLLPHLRDGSG--H-DEVIGEYT-AEGTLSPLMMIRRGDYKFIYSEQD-PCLLYDLRNDPQERENLAASPAHRGTFEAFLDEARRRWDIPAITRAVLDSQRRRRLVAAALARGRLASWDHQPWVDASQQYMRNHIDLDDLERRARFPQP |
| 3ED4 Chain:A ((27-477)) | ---QPNLVIIMADDLGYGDLATYG-HQIVKTPNIDRLAQEGVKFTDYYAPAPLSSPSRAGLLTGRMPFRTGIRSWIPSGKDVALGRNELTIANLLKAQGYDTAMMGKLHLNAGGDRTDQPQAQDMGFDYSLANTAGFVTDATLDNAKERPRYGMVYPTGWL-------RNGQPTPRADKMSGEYVSSEVVNWLDNKK---DSKPFFLYVAFTEVHSPLASPKKYLDMYSQYMSAYQKQ------HPDL----------FYGDWADKP-WRGVGEYYANISYLDAQVGKVLDKIKAMGEEDNTIVIFTSDNGPVTREARKVYELNLAGETDGLRGRKDNLWEGGIRVPAIIKYGKHLPQGMVSDTPVYGLDWMPTLAKMMNFKLPTDRTFDGESLVPVLEQKALKREKPLIFGIDMPFQDDPTDEWAIRDGDWKMIIDRNNKPKYLYNLKSDRYETLNLIGKK--PDIEKQMYGKFLKYKTDIDNDSLMKARGDKPEAVTWG---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ED4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213747 for 3624 contacts (-59.0/contact) +
2D Compatibility (PS) -43736 + (NN) -21576 + (LL) 6784
1D Compatibility (HY) -18400 + (ID) 5250
Total energy: -295925.0 ( -81.66 by residue)
QMean score : 0.448
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