Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MTDNPFATPTAPVQ-------PPAREVPATTQPYAFIAVLALVTCLSFAVSLGIQWYNDIGEIR-QRFSEHLQLMAPHWFTGLVF----YAAANLLVLHAYREKRQLVEFRPLALLLIGYGLLNLVCGMLAGIGL---------------APLTLPF-----------YQWVTAQSSYGVWLMAFNEAMSWVYLLLGSLLPLGLVLLGSRVNSPRLAEGEEARVAAWQVALGAALCFATLCFKLMQFL-------PYALLRYDEPWLYGLYLSGVALPAALLFGAVCTRLPARLQRFA--------AGRALLLAVVAMLL-----------------------------------WSVALLAVGGGLALLMILGLAPAGIGY---------TLLVALLGVGLLALLW----PIGRLATRW----CYADQLAA----------- |
| 2BMF Chain:A ((169-618)) | MASIEDNPEIEDDIFRKKRLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILAPTRVVAAEMEEALRGLPIRYQTGREIVDLMCHATFTMRLLSPIRVPNYNLIIMDEAHFTD------PASIAARGYISTRVEMGEAAGIFMTATPPGSRDPFPQSNAPIMDEEREIPERSWNSGHEWVTDFKGKTVWFVPSIKAGNDIAACLRKN-GKKVIQLSRK---TFDSEYIKTRTNDWDFVVTTDISEMGANFKAERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSAAQRRGRVGRNPKNENDQYIYMGEPLENDEDCAHWKEAKMLLDNINTPEGIIPSMFEPEREKVDAIDGEYRLRGEARKTFVDLMRRGDLPVWLAYRVAAEGINYADRRWCFDGVKNNQILEENVEVEIWTKEGERKKLKPRWLDARIYSDPLALKEFKEFAAGRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -297172 for 2334 contacts (-127.3/contact) +
2D Compatibility (PS) -32455 + (NN) 3639 + (LL) 1084
1D Compatibility (HY) -3200 + (ID) 3250
Total energy: -331354.0 ( -141.97 by residue)
QMean score : 0.170
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