Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSANPLLQAYDLPPFSSIRPEHVKPAIERILADNRAAIARLLETQREQPTWKGLVLAMDELNDRLGAAWSPVSHLNAVCNSAE-LREAYEACLPELSAYSTELG-QNRALFEAYEALAKSPEAAGFDVAQKTILEHALRDFRLSGIDLPADKQKRYAEVQSRLSELGSRFSNQLLDATQAWTKHVTDEAALAGLTDSAKAQMKQAAEAKGLDGWLISLEFPSYYAVMTYADDRALREEVYAAYCTRASDQGPNAGQNDNGPVMEEILDLRQELAGLLGFANYAELSLA--TKMAESSDQVLSFLRDLAVRSKPFAARDLEQLRAYAAEQGCTELQSWDAGYYAEKLREARYSVSQEALRAYFPVDKVLSGLF----AIVERLYGIQIRELHDFERWHADVRLFEILENGEHVGRFYFDLYARANKRGGAWMDGARDRRRDAQGRLIDPVAYLVCNFTPAVNGKPALLTHDEVTTLFHEFGHGLHHLLTRV-EHAAASGINGVAWDAVELPSQFMENWCWEPEGLALISAHYETGVALPQDLLEKMLAAKNFQSGMMMVRQLEFSLFDFELHATHG-DGRSVLQVLEGIRDEVAVMRPPAYNRFANSFAHIFAGGYAAGYYSYKWAEVLSADAFSRFEEEGVFNPDTGRAFREAILARGGSREPMLLFVDFRGREPSIDALLRHSGLVGEAA |
| 3SKS Chain:A ((36-538)) | -----------------------------------------------VEEQKQVIHSINEIRNDFGTMGNLCYIRHSVDTTDAFYKEEQDFFD----EFSPVVQGYGTKYYNALIHSPF---REELE----AYYGKQLFALAECDLKTYSDEVVKDLQ---LENKLSSQYTQLLASA----KID--------------------------FAGEERTL--SQLIPFMQG-KERSERKAASEAYYGFLAENE-----EELDRIYDELVKVRTKIAKSLGFKNFVELGYARMYRTDYNAEMVANYRQQVLDYIVPVTTELRKRQ---QARIGVEKLAYYDENFEFPT----------GNP----TPKGDADWIVNHGKTMY-KELSAETDEFF-----------------NFMLDNDLLDLVAKKGKAGGGYCTYIENY--------KAPF--IFSNFNG---------TSGDIDVLTHEAGHAFQVYESRKFEIPEYNWP---TYEACEIHSMSMEFFTWPWMKLF-FEED--------AD---KYYFSHLSSALLFLPYGVSVDEYQHYVYENPEASPEERKTAWRNIEKKYLPH-------------------SPFYYIDYTLAQICALQFWKRARDNR---QEAWEDYVN-LCQQGGSKSFLELVEVA-NLTSPFAEGCVKSVITEIEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142757 for 3744 contacts (-38.1/contact) +
2D Compatibility (PS) -49777 + (NN) -13732 + (LL) 14380
1D Compatibility (HY) -18000 + (ID) 3600
Total energy: -213486.0 ( -57.02 by residue)
QMean score : 0.338
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