Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSWNNRVVWSEGMFLRPQHFQQHDRYLETLVDGRCRSLLAGGWGFSELKLDDAL-------LTQGKLAIVSARGVLPDGTPFNIPADDPAPAPLNVEESLRDGIVYLGLPLKRVGTRDTVEEGEALGGARYVSQVQEVRDDNAAFESRAPVALGSQAFRLLTERDGLGEYAAVGVARVREKRADQALSLDEDYLPPVLDIAAAPPLASFAKELLGLLHQRGEALAGRVVASSAGGASEIADFLLLQLVNRAEALTGHLSRVRPLHPQELYRELVALAGEFCTFTASQRRPEEYPVYNHDDLAA-SFAPVMLALRQALATVIDAKAIAIPIVEKAYGVHVAMLSDRSLIDNASFVLVVRADVPGESLRGHFPQQAKVGSVEHIRDLVNLQLPGIGLLPMPVAPRQIPYHAGSTYFELDRGSAHWKQLTHSGGFAFHIAGQFPGLNLAFWAIRG |
3IYM Chain:A ((39-434)) | ASASKAAAFAQGGSSDPV--PMPGKYPVVFSTGAGEPTRDQEFALPVHKAFPLFGSVSDKYRRNPRYAEFRAHSEFTDG---VFGTHLAVSSLLRLAQQLVHAHVNMGLPLGDFAPLASSD----------VRIPSALASVVNQFGEFSSPSIGT---RFLLRDFEHAVSRVVFLADQLWTNGNSHHIFARSWLPMSNNDGNFKTIV--ASRLLEFISAGDLSILPTVLEDAVLSGEVPEAWEQVKDLLGDAPGVG------QVDRRDRFDFLFKSYADVGQFTTAFTTQAASDVLTELGLPWNSPSAGHLNWQYSTKQRFTFLADTWAKLSAAYSQFFELSSGLATRQSAT------------GSHAQMVDLTSVEGVTVLKAALALSAPEFSL--AACFPPSCIFVG-----GLTRRVVVTTSLSVSQRATEFCQMDWR----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22098 for 2989 contacts (7.4/contact) +
2D Compatibility (PS) -40380 + (NN) -11149 + (LL) 3608
1D Compatibility (HY) -6400 + (ID) 1550
Total energy: -33773.0 ( -11.30 by residue)
QMean score : 0.087
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