Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVDMFIKIGDVKGESKDKTHAEEIDVLAWSWGMSQ--SGSMHMGGGGGAGKVNVQDLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQKADGAKDGGPVKYGWNIRQNVQA
4W64 Chain:C ((16-164))
-----------VDGESRDSEHKGWLEVNSWSHNIRQPKSATSSSVGGHTAERVEHSDMVFVKDLDATSPKLWEACSAGYTFDEVQIDFYRANGDKRIKYLQIKLKHVLVSSV-TPTVNEEGVPTEAFGLKYAAVEWTYNQQDINGTAKGAVTK-KWSLSNNTAS
General information:
TITO was launched using:
RESULT:
Template:
4W64.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21554 for 905 contacts (-23.8/contact) +
2D Compatibility (PS) -15371 + (NN) -1377 + (LL) 1096
1D Compatibility (HY) -8400 + (ID) 2600
Total energy: -48206.0 ( -53.27 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_4W64.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4W64-query.scw
PDB file :
Tito_Scwrl_4W64.pdb
: